Arl4c ADP-ribosylation factor-like 4C [Mus musculus (house mouse)] - Gene (2024)

Summary

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Official Symbol
Arl4cprovided by MGI
Official Full Name
ADP-ribosylation factor-like 4Cprovided by MGI
Primary source
MGI:MGI:2445172
See related
Ensembl:ENSMUSG00000049866 AllianceGenome:MGI:2445172
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
LAK; Arl7; A630084M22Rik
Summary
Predicted to enable GTP binding activity and alpha-tubulin binding activity. Predicted to be involved in endocytic recycling and intracellular protein transport. Predicted to be located in cytosol. Predicted to be active in cytoplasm and plasma membrane. Is expressed in central nervous system; dorsal root ganglion; retina; and trigeminal nerve. Orthologous to human ARL4C (ADP ribosylation factor like GTPase 4C). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human all
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Genomic context

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See Arl4c in Genome Data Viewer

Location:
1 D; 1 44.85 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (88625947..88629913, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (88698225..88702191, complement)

Chromosome 1 - NC_000067.7Arl4c ADP-ribosylation factor-like 4C [Mus musculus (house mouse)] - Gene (1)Neighboring gene STARR-seq mESC enhancer starr_01639Neighboring gene predicted gene, 19589Neighboring gene predicted gene, 41912Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:90551407-90551606Neighboring gene pluripotency associated transcript 5Neighboring gene STARR-seq mESC enhancer starr_01649Neighboring gene STARR-seq mESC enhancer starr_01652Neighboring gene predicted gene 4753

Genomic regions, transcripts, and products

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Go to reference sequence details

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A combination of Wnt and growth factor signaling induces Arl4c expression to form epithelial tubular structures. Matsumoto S, et al. EMBO J, 2014 Apr 1. PMID 24562386, Free PMC Article
  2. Constitutive activation of LXR in macrophages regulates metabolic and inflammatory gene expression: identification of ARL7 as a direct target. Hong C, et al. J Lipid Res, 2011 Mar. PMID 21187453, Free PMC Article
  3. ADP-ribosylation factor (ARF)-like 4, 6, and 7 represent a subgroup of the ARF family characterization by rapid nucleotide exchange and a nuclear localization signal. Jacobs S, et al. FEBS Lett, 1999 Aug 13. PMID 10462049
  4. MiR-26 controls LXR-dependent cholesterol efflux by targeting ABCA1 and ARL7. Sun D, et al. FEBS Lett, 2012 May 21. PMID 22673513
  5. CRL5-dependent regulation of the small GTPases ARL4C and ARF6 controls hippocampal morphogenesis. Han JS, et al. Proc Natl Acad Sci U S A, 2020 Sep 15. PMID 32873638, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

  1. Arl4c is involved in tooth germ development through osteoblastic/ameloblastic differentiation.

    Title: Arl4c is involved in tooth germ development through osteoblastic/ameloblastic differentiation.

  2. CRL5-dependent regulation of the small GTPases ARL4C and ARF6 controls hippocampal morphogenesis.

    Title: CRL5-dependent regulation of the small GTPases ARL4C and ARF6 controls hippocampal morphogenesis.

  3. describe that miR-26, an LXR-suppressed miRNA, inhibits the expression of the ATP-binding cassette transporter A1 (ABCA1) and ADP-ribosylation factor-like 7 (ARL7), two LXR target genes which play critical roles in cholesterol efflux

    Title: MiR-26 controls LXR-dependent cholesterol efflux by targeting ABCA1 and ARL7.

  4. an important role of LXRs in the coordinated regulation of lipid metabolic and inflammatory gene programs in macrophages

    Title: Constitutive activation of LXR in macrophages regulates metabolic and inflammatory gene expression: identification of ARL7 as a direct target.

Submit: New GeneRIF Correction

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

  • Endonuclease-mediated (3)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GTP binding IBA

Inferred from Biological aspect of Ancestor
more info

enables GTPase activity IEA

Inferred from Electronic Annotation
more info

enables alpha-tubulin binding ISO

Inferred from Sequence Orthology
more info

enables nucleotide binding IEA

Inferred from Electronic Annotation
more info

Process Evidence Code Pubs
involved_in endocytic recycling IBA

Inferred from Biological aspect of Ancestor
more info

involved_in endocytic recycling ISO

Inferred from Sequence Orthology
more info

involved_in intracellular protein transport IBA

Inferred from Biological aspect of Ancestor
more info

Component Evidence Code Pubs
located_in cell projection IEA

Inferred from Electronic Annotation
more info

is_active_in cytoplasm IBA

Inferred from Biological aspect of Ancestor
more info

located_in cytoplasm ISO

Inferred from Sequence Orthology
more info

located_in cytosol ISO

Inferred from Sequence Orthology
more info

located_in membrane IEA

Inferred from Electronic Annotation
more info

is_active_in plasma membrane IBA

Inferred from Biological aspect of Ancestor
more info

located_in plasma membrane ISO

Inferred from Sequence Orthology
more info

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 4C
Names
ADP-ribosylation factor-like 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177305.4NP_796279.2 ADP-ribosylation factor-like protein 4C

    See identical proteins and their annotated locations for NP_796279.2

    Status: VALIDATED

    Source sequence(s)
    AC115303, BC055769, BU709624
    Consensus CDS
    CCDS15146.1
    UniProtKB/Swiss-Prot
    P61208
    UniProtKB/TrEMBL
    Q8BV33
    Related
    ENSMUSP00000124344.2, ENSMUST00000159814.2
    Conserved Domains (1) summary
    cd04152
    Location:11192
    Arl4_Arl7; Arf-like 4 (Arl4) and 7 (Arl7) GTPases

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7Reference GRCm39 C57BL/6J

    Range
    88625947..88629913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P61208.1 GenPept UniProtKB/Swiss-Prot:P61208

Additional links

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Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases

Arl4c ADP-ribosylation factor-like 4C [Mus musculus (house mouse)] - Gene (2024)

FAQs

What is ADP-ribosylation factor like 4C? ›

ADP-ribosylation factor-like 4C is a member of the ADP-ribosylation factor family of GTP-binding proteins. ARL4C is closely similar to ARL4A and ARL4D and each has a nuclear localization signal and an unusually high guanine nucleotide exchange rate. This protein may play a role in cholesterol transport.

What is the function of the ADP-ribosylation factor 1? ›

The ADP-Ribosylation Factor 1 acts as a master regulator of Golgi structure and function through the recruitment and activation of various downstream effectors.

What are the effects of ADP-ribosylation? ›

ADP-ribosylation is the addition of one or more ADP-ribose moieties to a protein. It is a reversible post-translational modification that is involved in many cellular processes, including cell signaling, DNA repair, gene regulation and apoptosis. Improper ADP-ribosylation has been implicated in some forms of cancer.

What toxin causes ADP-ribosylation of EF2? ›

Diphtheria toxin inactivates protein synthesis elon- gation factor 2 by catalyzing the ADP-ribosylation of a novel derivative of histidine, diphthamide, in the pro- tein (Van Ness, B. G., Howard, J. B., and Bodley, J.

What is the role of ADP in the body? ›

Adenosine diphosphate (ADP) is a biological molecule consisting of one adenine, one sugar, and two phosphates. Its most important role is that it is combined with a phosphate molecule to make ATP, the premier energy molecule in living cells. ADP is also used to help activate platelets in clotting.

How does ADP work in the body? ›

ADP is stored in dense bodies inside blood platelets and is released upon platelet activation. ADP interacts with a family of ADP receptors found on platelets (P2Y1, P2Y12, and P2X1), which leads to platelet activation. P2Y1 receptors initiate platelet aggregation and shape change as a result of interactions with ADP.

What is the meaning of ribosylation? ›

ADP-ribosylation is the post-translational modification of proteins through the transfer of ADP-ribose from NAD+ to a specific amino acid within a substrate. 1. Substrates can be modified with a single ADP-ribose moiety (mono-ADP ribosylation) or poly-ADP ribose (PAR) chains.

What is the adenosine ribosylation factor? ›

Adenosine diphosphate-ribosylation factor (Arf) proteins are members of the Arf arm of the Ras superfamily of guanosine triphosphate (GTP)-binding proteins. Arfs are named for their activity as cofactors for cholera toxin-catalyzed adenosine diphosphate-ribosylation of the heterotrimeric G protein Gs.

What is ADP-ribosylation factor like protein 1? ›

Data show that ADP-ribosylation factor-related protein 1 (ARFRP1) is associated mainly with the trans-Golgi compartment and the trans-Golgi network (TGN) and is an essential regulatory factor for targeting of golgin-97 and golgin-245 onto Golgi membranes.

What is an example of ADP-ribosylation? ›

For example, Mono-ADP-ribosylation on H4 seems to occur preferentially when H4 is hyperacetylated and mono-ADP-ribosylation of histone H1. 3 on arginine 33 (R33) may reduce cyclic AMP-dependent phosphorylation of Serine 36 (S36) [67].

What is ADP-ribosylation of elongation factor 2? ›

Elongation factor 2 (EF2)

Following ADP-ribosylation, EF2 is unable to carry out protein synthesis, and this causes rapid cell death. The region containing diphthamide 715 is very close to the anticodon recognition domain of EF2. This suggests that ADP-ribosylation interferes with EF2 binding to the tRNA.

References

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